{ "_id": "6aacf36c3d719c1f840737bd", "Package": "MetSizeR", "Title": "A Shiny App for Sample Size Estimation in Metabolomic\nExperiments", "Version": "2.0.0", "Date": "2021-08-20", "Authors@R": "c(person(given = \"Kate\",\nfamily = \"Finucane\",\nrole = c(\"aut\", \"cre\"),\nemail = \"kate.finucane@ucdconnect.ie\"),\nperson(given = \"Gift\",\nfamily = \"Nyamundanda\",\nrole = c(\"aut\")),\nperson(given = \"Isobel Claire\",\nfamily = \"Gormley\",\nrole = c(\"aut\")),\nperson(given = \"Yue\",\nfamily = \"Fan\",\nrole = c(\"aut\")),\nperson(given = \"William M\",\nfamily = \"Gallagher\",\nrole = c(\"aut\")),\nperson(given = \"Lorraine\",\nfamily = \"Brennan\",\nrole = c(\"aut\")))", "Description": "Provides a Shiny application to estimate the sample size\nrequired for a metabolomic experiment to achieve a desired\nstatistical power. Estimation is possible with or without\navailable data from a pilot study.", "License": "GPL (>= 3)", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.1.1", "VignetteBuilder": "knitr", "Config/pak/sysreqs": "cmake make libuv1-dev zlib1g-dev", "Repository": "https://kfinucane.r-universe.dev", "Date/Publication": "2021-08-20 00:03:38 UTC", "RemoteUrl": "https://github.com/kfinucane/metsizer", "RemoteRef": "HEAD", "RemoteSha": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "NeedsCompilation": "no", "Packaged": { "Date": "2026-09-18 07:39:19 UTC", "User": "root" }, "Author": "Kate Finucane [aut, cre],\nGift Nyamundanda [aut],\nIsobel Claire Gormley [aut],\nYue Fan [aut],\nWilliam M Gallagher [aut],\nLorraine Brennan [aut]", "Maintainer": "Kate Finucane ", "_user": "kfinucane", "_type": "src", "_file": "MetSizeR_2.0.0.tar.gz", "_fileid": "https://r2.ropensci.org/43ba79036694ecdf14aad238727f2b9213ed0079992132c3cceceec69a5c0f2c", "_filesize": 472333, "_sha256": "43ba79036694ecdf14aad238727f2b9213ed0079992132c3cceceec69a5c0f2c", "_expires": "2026-12-27T08:16:42.000Z", "_created": "2026-09-18T07:39:19.000Z", "_published": "2026-09-18T08:16:44.539Z", "_jobs": [ { "job": 105521653645, "time": 142, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10536901613" }, { "job": 105521653692, "time": 146, "config": "linux-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10536946602" }, { "job": 105521653497, "time": 191, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "10537229649" }, { "job": 105521653473, "time": 152, "config": "macos-release-arm64", "r": "4.6.1", "check": "OK", "artifact": "10537399936" }, { "job": 105520889647, "time": 184, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "10536821813" }, { "job": 105521653458, "time": 145, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "10537206290" }, { "job": 105521653618, "time": 93, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "10536394519" }, { "job": 105521653499, "time": 83, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "OK", "artifact": "10536284646" }, { "job": 105521653543, "time": 76, "config": "windows-release-x86_64", "r": "4.6.1", "check": "OK", "artifact": "10536693855" } ], "_host": "GitHub-Actions", "_buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163", "_status": "success", "_upstream": "https://github.com/kfinucane/metsizer", "_commit": { "id": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "author": "Kate F ", "committer": "Kate F ", "message": "Final code for thesis submission\n", "time": 1629417818 }, "_maintainer": { "name": "Kate Finucane", "email": "kate.finucane@ucdconnect.ie", "login": "kfinucane", "description": "", "uuid": 89215650 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "MetabolAnalyze", "role": "Imports" }, { "package": "Rfast", "role": "Imports" }, { "package": "shiny", "role": "Imports" }, { "package": "shinythemes", "role": "Imports" }, { "package": "stats", "role": "Imports" }, { "package": "tools", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "vroom", "role": "Imports" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "knitr", "role": "Suggests" } ], "_owner": "kfinucane", "_selfowned": true, "_usedby": 0, "_updates": [], "_tags": [], "_stars": 0, "_contributors": [ { "user": "kfinucane", "count": 7, "uuid": 89215650 } ], "_userbio": { "uuid": 89215650, "type": "user", "name": "Kate Finucane", "followers": 3 }, "_downloads": { "count": 290, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/MetSizeR" }, "_mentions": 9, "_devurl": "https://github.com/kfinucane/metsizer", "_searchresults": 4, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/manual.pdf", "extra/MetSizeR.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md" ], "_homeurl": "https://github.com/kfinucane/metsizer", "_realowner": "kfinucane", "_cranurl": true, "_releases": [ { "version": "0.99", "date": "2013-09-12" }, { "version": "1.1", "date": "2014-12-08" }, { "version": "2.0.0", "date": "2021-08-20" } ], "_exports": [ "metsize", "MetSizeR" ], "_help": [ { "page": "metsize", "title": "Metsize", "topics": [ "metsize" ] }, { "page": "MetSizeR", "title": "MetsizeR Launcher", "topics": [ "MetSizeR" ] } ], "_readme": "https://github.com/kfinucane/metsizer/raw/HEAD/README.md", "_rundeps": [ "base64enc", "bit", "bit64", "bitops", "bslib", "cachem", "caTools", "cli", "commonmark", "cpp11", "crayon", "digest", "dplyr", "ellipse", "farver", "fastmap", "fontawesome", "fs", "generics", "ggplot2", "glue", "gplots", "gtable", "gtools", "hms", "htmltools", "httpuv", "isoband", "jquerylib", "jsonlite", "KernSmooth", "labeling", "later", "lifecycle", "magrittr", "mclust", "memoise", "MetabolAnalyze", "mime", "mvtnorm", "otel", "pillar", "pkgconfig", "prettyunits", "progress", "promises", "R6", "rappdirs", "RColorBrewer", "Rcpp", "RcppArmadillo", "RcppParallel", "Rfast", "rlang", "S7", "sass", "scales", "shiny", "shinythemes", "sourcetools", "tibble", "tidyselect", "tzdb", "utf8", "vctrs", "viridisLite", "vroom", "withr", "xtable", "zigg" ], "_vignettes": [ { "source": "MetSizeR_vignette.Rmd", "filename": "MetSizeR_vignette.html", "title": "MetSizeR Handbook", "author": "Kate Finucane, Gift Nyamundanda, Isobel Claire Gormley,, Yue Fan, William M Gallagher, and Lorraine Brennan", "engine": "knitr::rmarkdown", "headings": [ "Background", "Package Functionality", "Installation Instructions", "Loading the Application", "Sample Size Estimation", "Sample Size Estimation in the Absence of Pilot Data", "Inputs", "Sample Size Estimation Using Pilot Data", "Varying the Proportion of Significant Metabolites/Bins", "References" ], "created": "2021-08-19 17:30:26", "modified": "2021-08-19 22:45:55", "commits": 3 } ], "_score": 4.653212513775344, "_indexed": true, "_nocasepkg": "metsizer", "_universes": [ "kfinucane" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "2.0.0", "date": "2026-09-18T07:41:36.000Z", "distro": "resolute", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/7d4093abd108b1a6af2a634ba3dccd04747c60ed5cfa606647d8e30d425eb2e9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.6.1", "os": "linux", "version": "2.0.0", "date": "2026-09-18T07:41:39.000Z", "distro": "resolute", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/1a79de2ace439f44bf283b28d2a1502b86bfae2457817f5face605029c06faa1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.5.3", "os": "mac", "version": "2.0.0", "date": "2026-09-18T08:13:44.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/271aba6a134910943ec0089f88be617f9bf46943d88c74abae1d458990702795", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.6.1", "os": "mac", "version": "2.0.0", "date": "2026-09-18T08:15:25.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/16c2796bf53bc10954fda6d69b102eef25eca363c83b30efaea7e2769db04b83", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.6.0", "os": "wasm", "version": "2.0.0", "date": "2026-09-18T07:41:55.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/0bab720ab45b67e5b8c2aacc8659c95aa710f33779e24a32d5c323c80e0e00a1", "status": "success", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.7.0", "os": "win", "version": "2.0.0", "date": "2026-09-18T07:40:41.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/2bcf520f42291034ddd710a07d7c1369b56c11927135a79a3e6880f12e9625f5", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.5.3", "os": "win", "version": "2.0.0", "date": "2026-09-18T07:40:29.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/1ea65d316318fdcfad47cfb344cf7e15808621b6eaafaccab9131bba901585d2", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" }, { "r": "4.6.1", "os": "win", "version": "2.0.0", "date": "2026-09-18T07:40:25.000Z", "commit": "8b9d71c78cc70bdc34b02dd7cf9ce362351940e4", "fileid": "https://r2.ropensci.org/58616c9b4a78af20a9bb25b06c918a949a4e1f279705e11a215dd81252320bd1", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/kfinucane/actions/runs/35320207163" } ] }